SimuCell

An open-source framework to synthetically generate fluorescent microscopic images of cellular population.

Build your Images from the GUI

Modular : Create your own Plugins

Fully Scriptable

                %Perlin Texture
                op=Perlin_Texture();
                set(op,'amplitude',0.7);
                set(op,'length_scale',5);
                set(op,'frequency_falloff',0.8);
                subpop{1}.markers.Density_Marker.nucleus.AddOperation(op);
% Throw in some turbulence % Turbulent Texture op=Turbulent_Texture(); set(op,'max_displacement',5); set(op,'length_scale',4); set(op,'frequency_falloff',0.7); subpop{1}.markers.Density_Marker.nucleus.AddOperation(op);

Example Frame